Insertion junction: CLIP2.066637_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.066637
Chromosome:chromosome 10
Location:4153528
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g448850 FAP135,ODA5AK,CAL5 (1 of 3) 3.4.22.54 - Calpain-3 / Muscle-specific calcium-activated neutral protease 3; Calpain-Like Flagellar Associated Protein 135 3'UTR
Cre10.g448900 (1 of 80) IPR003882 - Pistil-specific extensin-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAAGCACAAGGCCACCGGGCGTTTCAAGTTTTGCCAGCTAGAATGTCGC
Internal bar code:ACCGCACCCAGACGCACAGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:190
LEAP-Seq percent confirming:2.94118
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGAGAATGTGCTCACCGT
Suggested primer 2:TAGTGCCTGCCTACCAAAGC