Insertion junction: CLIP2.066643_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.066643
Chromosome:chromosome 16
Location:7509702
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682363 (1 of 4) 2.4.1.229 - [Skp1-protein]-hydroxyproline N-acetylglucosaminyltransferase / transferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAACCCTGCCTCATTGCACCTAGTGCCCGCCTTGCACCTTCGGCAGCCA
Internal bar code:GGTGGAGAAAGGGGCGTTTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:843
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GGACTTTGAGCACGACCAGA
Suggested primer 2:TGCGGCGTTTGAGTAAGACT