Insertion junction: CLIP2.066643_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.066643
Chromosome:chromosome 16
Location:7509704
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682363 (1 of 4) 2.4.1.229 - [Skp1-protein]-hydroxyproline N-acetylglucosaminyltransferase / transferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGTAATATCATAGTTTACAGAGTATTCCCAGACTCCAACATTCAATTT
Internal bar code:GGTGGAGAAAGGGGCGTTTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2316
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGGCGTTTGAGTAAGACT
Suggested primer 2:GGACTTTGAGCACGACCAGA