Insertion junction: CLIP2.066649_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.066649
Chromosome:chromosome 3
Location:360362
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144667 CLPS4,CLPT4 (1 of 2) IPR023150 - Double Clp-N motif; Additional subunit of chloroplast ClpP complex 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTAGAGGCCAGGCCGGTCCACCGCCGTTCTCCATCGCCCTGGTCCATAA
Internal bar code:GGTTACCACTGAACAGTACAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1236
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGCAGCAAAGATCCTGAA
Suggested primer 2:CATTCATGCCGCTACCGTTG