Insertion junction: CLIP2.066660_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.066660
Chromosome:chromosome 2
Location:3168860
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g096601 (1 of 1) IPR001440//IPR013026//IPR019734 - Tetratricopeptide repeat 1 // Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACTCCAACCAATCACCAAACCAACCAACCAACCGCCAACAGCAACGAG
Internal bar code:ATGTCCTTCGGACTGGTGGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:379
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTCGGCACTTCACTTCAT
Suggested primer 2:CATGTGTATGTGCGGCCATG