Insertion junction: CLIP2.066673_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.066673
Chromosome:chromosome 2
Location:7660339
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g147500 3'UTR
Cre02.g147550 (1 of 2) IPR009057//IPR017877 - Homeodomain-like // Myb-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTAGATCCCGTATTCAGGACGGTCTAAGAGGGCAGGTCTGACACCTCA
Internal bar code:TAATACCTGAGGAGGGTCATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1490
LEAP-Seq percent confirming:65.3061
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:GTTAGCTTTAGACGCACGCG
Suggested primer 2:CCGCGCTTGTGATGTACATG