Insertion junction: CLIP2.066673_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.066673
Chromosome:chromosome 2
Location:7660341
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g147500 3'UTR
Cre02.g147550 (1 of 2) IPR009057//IPR017877 - Homeodomain-like // Myb-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATACTAGGCGTACACCACACATACTGATGATTGATTGATTGCAGAATGA
Internal bar code:TAATACCTGAGGAGGGTCATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:738
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCGCTTGTGATGTACATG
Suggested primer 2:GTTAGCTTTAGACGCACGCG