Insertion junction: CLIP2.066674_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066674
Chromosome:chromosome 9
Location:2835834
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g390957 (1 of 6) IPR001471//IPR016177 - AP2/ERF domain // DNA-binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTAGCTAGCAACAAGGGAAGTAACACACACACGATTTGATTGATTGTCT
Internal bar code:TACAACTTCTTTATGTTTATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3774
LEAP-Seq percent confirming:97.561
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGAGGAATACACGGACGA
Suggested primer 2:AGGCAATGAAGACAGTCCGG