Insertion junction: CLIP2.066679_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.066679
Chromosome:chromosome 5
Location:2965440
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g230600 UVR8 Ultraviolet-B receptor 8; (1 of 1) PTHR22870//PTHR22870:SF193 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCCCGAACTCCGCTGACCCTCCAGCCCTGGGCTCAGCAGCCGGGCATA
Internal bar code:AGTGCACAATGTCGATCATATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2623
LEAP-Seq percent confirming:98.4375
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGGCAGGTCATTCAGGTG
Suggested primer 2:CCTCCTCCTGATGGTCTCCA