Insertion junction: CLIP2.066688_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.066688
Chromosome:chromosome 11
Location:1393404
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g801256 (1 of 39) PTHR13078//PTHR13078:SF53 - FAMILY NOT NAMED // PROTEIN MAOC-1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTATCAGCTACTTACGCCCGCCCGTGGGCTTTGTACGCGGGTGGTCTT
Internal bar code:CAACCATGTGAACGTGAAGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3079
LEAP-Seq percent confirming:46.4646
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:53
LEAP-Seq n unique pos:99

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGACGCACTACAGCTGAC
Suggested primer 2:TGGACATCACACGGAACCAG