Insertion junction: CLIP2.066700_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.066700
Chromosome:chromosome 17
Location:6892484
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g747747 (1 of 18) PF12906 - RING-variant domain (RINGv) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCAAATAAACCACGAACACCGACGTTTTTAGCAGCTTACTATGCGCAC
Internal bar code:TCTGGGATACGATTGTGTATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2853
LEAP-Seq percent confirming:85.1852
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGCATTCGACCTGTACC
Suggested primer 2:CGCCATGCCACTTTATGAGC