Insertion junction: CLIP2.066707_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.066707
Chromosome:chromosome 10
Location:3969442
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446950 (1 of 2) PTHR23181//PTHR23181:SF7 - RHO GTPASE ACTIVATING PROTEIN // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTTCATTGCAAATCTATGCTGCTATTGGGTGTCCTGAGGCTCCCTGTG
Internal bar code:AGATGTAGAGTATATGGGCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:742
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTGCTCGCGAAGACTTCA
Suggested primer 2:ATCCAAACATGCCAGAGCGA