Insertion junction: CLIP2.066740_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.066740
Chromosome:chromosome 17
Location:3943803
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728050 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGGTCATGGCCCCCGCCCACGTGTCGCCATATGCTTTGGGGTTTGGG
Internal bar code:TCGATTAACGTTTGAGTGAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:959
LEAP-Seq percent confirming:43.75
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCCTCTCATCCATCTCCA
Suggested primer 2:GACGGGTTTGCCAGTAAGGA