Insertion junction: CLIP2.066765_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.066765
Chromosome:chromosome 9
Location:975156
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g402600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAACATGGCGCAAGTACTACTCAGCCGCAGCAGGCTGCTGCTTCTAAG
Internal bar code:TGTTTAACTTCTTGAGATGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2021
LEAP-Seq percent confirming:88.5714
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CATGGCAGAGGTGGAGACAG
Suggested primer 2:TCGGGAATCGTACCAGACCT