Insertion junction: CLIP2.066766_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066766
Chromosome:chromosome 9
Location:6332607
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g414200 VPS26 (1 of 1) K18466 - vacuolar protein sorting-associated protein 26 (VPS26); Subunit of Retromer complex 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATGTGGTTTTCTGGCCATACTCATTAAGATAATAGTGGCATTCACAA
Internal bar code:ACATTAAAGTGATAAGCGTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4272
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTAACGCTAGCTGGGAGC
Suggested primer 2:GTAGATAGCCTCAGCGCCTG