Insertion junction: CLIP2.066771_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.066771
Chromosome:chromosome 17
Location:5566250
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739600 (1 of 1) PF03988 - Repeat of Unknown Function (DUF347) (DUF347) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGTGCATCGGAAATTACTGGCTGCCGCACGTTAAAAGCCACAGGCCG
Internal bar code:GTCAGGCGCGTAAGCTGCACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1341
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGATGCAGTCCACTTCCT
Suggested primer 2:TCAGCTTCATTCACGCAGGT