Insertion junction: CLIP2.066773_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.066773
Chromosome:chromosome 4
Location:428685
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217917 (1 of 25) IPR001005//IPR009057//IPR017930 - SANT/Myb domain // Homeodomain-like // Myb domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGACCAGAAACACAAACGAGTCTACTGTGAACCCCCATCGCTGAAACCC
Internal bar code:CCAGTAGTCAGGCAAGTGAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4043
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCAGCTGCTGTTGTCAAG
Suggested primer 2:GGCCGACGATTGATTCAAGC