Insertion junction: CLIP2.066780_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.066780
Chromosome:chromosome 13
Location:1864935
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g575366 3'UTR
Cre13.g575400 (1 of 33) IPR013830 - SGNH hydrolase-type esterase domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAACCGCTTAAACCCAAACGCCAGCCCCAACATCCAGCAGCAAACGAAC
Internal bar code:ATCCGGCTTGAATGGGCTATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:5369
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGTGACCTACAGGCCGGT
Suggested primer 2:TGCGTCCCTTGTCATCAGAC