Insertion junction: CLIP2.066783_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.066783
Chromosome:chromosome 11
Location:4022643
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g480551 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGAGAGAACCCAGGGTGAGCCGATAAGTTGATGGACGGTTGGGGATCCT
Internal bar code:ATGTGAAGTATAGCGGGTGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1656
LEAP-Seq percent confirming:94.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGCACCTGGTTTACCGAG
Suggested primer 2:GCGCAAGATGATCACGTTCC