Insertion junction: CLIP2.066787_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.066787
Chromosome:chromosome 17
Location:6450226
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g744147 (1 of 1) K12854 - pre-mRNA-splicing helicase BRR2 (SNRNP200, BRR2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTTCCAGCCTGCCCAGCACAAGCTCTAGCAGCCAACATGTCGAACAAG
Internal bar code:GTTATTCAAAACAGGTACACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1008
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTTCACTACACCGGGCAC
Suggested primer 2:CTGTACATTGCGTCCCCTGT