Insertion junction: CLIP2.066789_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.066789
Chromosome:chromosome 14
Location:3973667
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g632950 NOT1 (1 of 1) K12604 - CCR4-NOT transcription complex subunit 1 (CNOT1, NOT1); Component of CCR4-NOT transcriptional regulator complex 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGTCCCGGATGTTTTATCGCGTCCCGAGTGTGCGAGTCCCAGTGTAGT
Internal bar code:GCTGGAGTTATTAGATAGCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2639
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGGTAGGGTAGGCTCACT
Suggested primer 2:GGCCTGCTCATCACCTTCAT