Insertion junction: CLIP2.066793_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.066793
Chromosome:chromosome 16
Location:7138593
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676197 RPN1 (1 of 1) K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1); 26S proteasome regulatory subunit 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTGAACAATCGTTCCGTTTATATGGAGTCGCGAGGGAATGGCTGTGGG
Internal bar code:TAGCAAGCTTGCTCGGTGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1998
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGCCGCTCCACCATCATG
Suggested primer 2:CCTGAGAGGCTGAGAGTCCT