Insertion junction: CLIP2.066800_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.066800
Chromosome:chromosome 5
Location:2185218
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g237450 PSRP1 Plastid-specific ribosomal protein 1; (1 of 1) PTHR33231//PTHR33231:SF1 - FAMILY NOT NAMED // 30S RIBOSOMAL PROTEIN-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGGGTCAAAACGTGGCAAACAGGAACCGCAGCCTGCCTATGTCTGGAA
Internal bar code:TAGTAGGCGAACTTAAAGGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5038
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGTAGGGCCGATCACGTG
Suggested primer 2:CGTTTGTGGTGCTTGTGAGG