Insertion junction: CLIP2.066806_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.066806
Chromosome:chromosome 4
Location:2979681
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g224883 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGTAGGCCGACGGCGTTGCAGGCGGCACGCCCCTGGGGTCCAGAGCAG
Internal bar code:TGTGTACTTTCAATAGCTCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5654
LEAP-Seq percent confirming:94.5946
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:TCCACCTGAAAGTGCGAGAC
Suggested primer 2:AGCGAGGCTACAAGTAGGGA