Insertion junction: CLIP2.066809_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.066809
Chromosome:chromosome 2
Location:1861525
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g087324 (1 of 39) IPR009003 - Peptidase S1, PA clan 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAGGGTTCAAGCGGCGCGGCGCCCACCGCTGCTGGCGGCGTGACGGGG
Internal bar code:ATAGCAGCGTTGGTAGACTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2777
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGATAGCTGTACACGGTC
Suggested primer 2:AGCTCAGTTGCAGCTCTCAG