Insertion junction: CLIP2.066823_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.066823
Chromosome:chromosome 6
Location:3283226
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g277300 (1 of 4) PTHR22849//PTHR22849:SF39 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACACACGTCACACACACGTCACACCGCACCGCCAGGAAAACCACAATG
Internal bar code:ACTCTATGCAATCGTGGGAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:684
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTATAGGGTTTGGAGGGC
Suggested primer 2:AGCCCAACACACAAAGGTCA