Insertion junction: CLIP2.066826_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066826
Chromosome:chromosome 7
Location:1437803
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g323500 (1 of 1) PF08609 - Nucleotide exchange factor Fes1 (Fes1) 3'UTR
Cre07.g323550 PUS8 (1 of 2) 5.4.99.19 - 16S rRNA pseudouridine(516) synthase / 16S RNA Psi(516) synthase; RNA pseudouridine synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTATGTAACTGTGTCCATTTTGTGCGTGACAGCGGTGCGCATTCCGAA
Internal bar code:CATGATCAATCTAGAATAATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1625
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GACCCCTACCACGACTACCT
Suggested primer 2:AGGAGACGGAAGAGGAGGAC