Insertion junction: CLIP2.066830_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.066830
Chromosome:chromosome 1
Location:6071262
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g042900 RRM1 Putative rRNA (adenine-N6-)-methyltransferase; (1 of 1) 2.1.1.183 - 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCCGCCACCCCCTCCTGCCTCCTGCCACTCATATTCTCCCCCCCTTTG
Internal bar code:TCTTAAGATACGTGATCGGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:140
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCAGGCTAGCGTGTCTAG
Suggested primer 2:CGTCTTGTTTTTGCGGCTGA