Insertion junction: CLIP2.066832_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.066832
Chromosome:chromosome 6
Location:1944395
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g264650 HTR14,HTR27 Histone H3; (1 of 35) K11253 - histone H3 (H3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATCGTCACACGCTTGGCGTGGATGGCGCACAGGTTGGTGTCCTCGAAC
Internal bar code:TCCAACTGTTGCCGGGCCGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1753
LEAP-Seq percent confirming:36.5854
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CGGATAGCGGGCTTGGTAAT
Suggested primer 2:CTAAGCGCGCCGAACTTAAC