Insertion junction: CLIP2.066834_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.066834
Chromosome:chromosome 9
Location:5773925
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801078 NAR1A (1 of 7) PTHR30520//PTHR30520:SF0 - FORMATE TRANSPORTER-RELATED // FORMATE TRANSPORTER 1-RELATED; Chloroplastic nitrite transporter 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCACACCCGAACGGCCGCTCCCTCGTTTTCGGTCGCACAGCCGCTATAG
Internal bar code:TATATTGAATTCTTCTGGTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1429
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CATTGCTGCCACCGTTTTGA
Suggested primer 2:AGGACCATGGAGAGCTGCTA