Insertion junction: CLIP2.066841_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.066841
Chromosome:contig 35
Location:14682
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre35.g802212 (1 of 2) PTHR18945:SF559 - PROTEIN LGC-12 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCGGGCCATACAGCGCTTGCCGGCAATGCATAACTGCTCTCCAGGAGC
Internal bar code:CATGTAATACTTCGCCGTGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:3552
LEAP-Seq percent confirming:4.7619
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACTGCAGCACCACATAT
Suggested primer 2:AACGGTACTGTGCGACACAT