Insertion junction: CLIP2.066848_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066848
Chromosome:chromosome 4
Location:3853335
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g230144 SPT1 Component of serine palmitoyltransferase; (1 of 1) PTHR13693//PTHR13693:SF3 - CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE // LD36009P 5'UTR
Cre04.g800500 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAGCTCTGTGGCTGCACTGATGATACGTTCGTCAATGATGATGACGTC
Internal bar code:ATTCACAGAAGACATCAATAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2803
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:AAGACTGACAGAGGCACAGC
Suggested primer 2:AAGTCCTCCATCGTGCCTTG