Insertion junction: CLIP2.066856_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.066856
Chromosome:chromosome 16
Location:6081424
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677650 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTAGTGGTGAGAATTCAATTTTGCCAAGAGTGGGACTCAATGTAGATT
Internal bar code:ATTTTCATATTAGACAGCGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4910
LEAP-Seq percent confirming:98.3333
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCCGGTTACAACTGAAGA
Suggested primer 2:GAGCAAGGAGGATACGGCTC