Insertion junction: CLIP2.066858_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.066858
Chromosome:chromosome 7
Location:4497117
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g343567 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGACTACGCTTTCCTGCCCCTTGCCATGTTCCATCACATGCCGACGTGT
Internal bar code:GCTAGGCGTGATATGTCGCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4726
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTAAGCCGAGTCGTTCAG
Suggested primer 2:TGCTTTGCTTCGCCTTGTTC