Insertion junction: CLIP2.066858_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066858
Chromosome:chromosome 7
Location:4497121
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g343567 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCGATGTGTGTGGCTCCCACCCGTGCCCACATAAATGCGTAGCAAGAA
Internal bar code:TAAATTTTGGCGGTAGCAACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3582
LEAP-Seq percent confirming:82.1429
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTTTGCTTCGCCTTGTTC
Suggested primer 2:ACGTAAGCCGAGTCGTTCAG