Insertion junction: CLIP2.066864_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.066864
Chromosome:chromosome 1
Location:5178402
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036150 (1 of 1) PTHR14095:SF0 - PROTEIN C06G1.5, ISOFORM B 5'UTR
Cre01.g036200 (1 of 1) PF01477//PF07228 - PLAT/LH2 domain (PLAT) // Stage II sporulation protein E (SpoIIE) (SpoIIE) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTCGCAAGCCCTTGCATGGGCAAACTGGTGGCAGGGTTATGCGCTGGT
Internal bar code:CGGCTTTTTTGATGCGGCCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1157
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCGTATCAAACTGCTCAG
Suggested primer 2:TCAAGGCCTTTAGCACCCTG