Insertion junction: CLIP2.066866_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066866
Chromosome:chromosome 8
Location:4203936
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre08.g383900 (1 of 125) IPR001841 - Zinc finger, RING-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCAATTAGCGAGAGCTATTGCCCTAAGCCGGTGCCGACCCGGCTAACA
Internal bar code:CTCGTTGCGCGCCCTCTTCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:6489
LEAP-Seq percent confirming:2.27273
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:43
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTTCGTGTGCTACCCTT
Suggested primer 2:CCCCATTCACACTCCCACTC