Insertion junction: CLIP2.066867_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.066867
Chromosome:chromosome 9
Location:1303336
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400700 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCAGCCTTCTACAATGCAGCTTTCATCACAACTCTCGGCGGGAAGTCC
Internal bar code:TGGCAACGTAAGGTCAGGCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2370
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTCCCCTCCTCCTCATCA
Suggested primer 2:GGCTAATGCTTACTGTGCGC