Insertion junction: CLIP2.066880_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.066880
Chromosome:chromosome 14
Location:3019439
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g627750 (1 of 13) PTHR13244//PTHR32523//PTHR32523:SF8 - ZINC FINGER MYND DOMAIN CONTAINING PROTEIN 10 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACACGTGCACCCGCCCACACCAACACAGCATGGGCCAACGGCAGCTA
Internal bar code:GTCTGAAATCACCAGTCTATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1641
LEAP-Seq percent confirming:55.7692
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGAACCTGATGTCCCCAG
Suggested primer 2:TACCCACGAGAAACACACGG