Insertion junction: CLIP2.066888_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066888
Chromosome:chromosome 9
Location:5257311
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g407120 (1 of 781) IPR000104 - Antifreeze protein, type I outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCCTAGGGTGCTAGGTGACGGCGGCATTGTTATGACTTAGGGTGCGCT
Internal bar code:TCCGGAGAAATGTGTAATACT

Confirmation - LEAP-Seq

LEAP-Seq distance:3338
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:152
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:152

Suggested primers for confirmation by PCR

Suggested primer 1:GCACCCTGACTCGATACTCG
Suggested primer 2:GTGTGAGGCAGGTGCTAACT