Insertion junction: CLIP2.066888_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.066888
Chromosome:chromosome 9
Location:5257314
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g407120 (1 of 781) IPR000104 - Antifreeze protein, type I outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCATACCCAGCTCGTCCAGCGCTGTTTCCTTGCGGGCAACAAGCAAGC
Internal bar code:TCCGGAGAAATGTGTAATACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1179
LEAP-Seq percent confirming:97.6744
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGAGGCAGGTGCTAACT
Suggested primer 2:GCACCCTGACTCGATACTCG