Insertion junction: CLIP2.066892_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.066892
Chromosome:chromosome 6
Location:3806624
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278175 (1 of 1) K14793 - ribosomal RNA-processing protein 9 (RRP9) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTTGCTGACGCGCATTCCTCACGCTCCGGGCGCCCGGCCAAGGCGATA
Internal bar code:GTGAGGTAGGTGTCAGCCTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1127
LEAP-Seq percent confirming:86.9565
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAGAAGGAGGATGCAAGA
Suggested primer 2:TGGAGAGATGGGGAAGGGAG