Insertion junction: CLIP2.066893_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.066893
Chromosome:chromosome 4
Location:2653092
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g223100 CAH1 (1 of 2) PTHR18952//PTHR18952:SF104 - CARBONIC ANHYDRASE // CARBONIC ANHYDRASE-RELATED PROTEIN; Carbonic anhydrase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGGGGCGCTTCAGCACGGTATGGTTGCCAGCATGCACGGTCCGGCCT
Internal bar code:TAATTTAAGTAGGTCGGTATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1070
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCCCACGTTTTCCCTTTG
Suggested primer 2:GCTTCACGGTTTGGTGTGTC