Insertion junction: CLIP2.066899_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.066899
Chromosome:chromosome 16
Location:96785
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g695550 3'UTR
Cre16.g695600 DNJ10 DnaJ-like protein and Myb-like transcription factor; (1 of 1) PTHR24078:SF307 - MOLECULAR CHAPERONE HSP40/DNAJ-LIKE PROTEIN 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGATGGAGCGGCTGGGTCGGCACATACAATCAATCCAATGGCGGTCT
Internal bar code:ACTGTCAGAGGGTTGGCAGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:991
LEAP-Seq percent confirming:44.186
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTGCCGTACGAGTACTAC
Suggested primer 2:ACACCCAATTCCCCGATCAC