Insertion junction: CLIP2.066901_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.066901
Chromosome:chromosome 17
Location:6647151
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g745797 (1 of 40) IPR000182//IPR016181 - GNAT domain // Acyl-CoA N-acyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCAGCCCATGCCGGGCGCGGCTCCAGACATGGACCTGCGGGCGAGCGC
Internal bar code:CTAGACTTGTCGGAAGACTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1098
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ATACGGATGCACATGCTCGT
Suggested primer 2:TATGACCCCCTGACACCCAT