Insertion junction: CLIP2.066904_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.066904
Chromosome:chromosome 13
Location:1639052
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g573550 ANK26 Predicted protein with ankyrin repeats; (1 of 7) PF12796//PF13637 - Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_4) 3'UTR
Cre13.g573600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCCGCCCAAAGGCCTTCACCGCAAATTGCGCCGGAATCGCACCGTAAT
Internal bar code:AGATGCGCAGTTTGAGGTTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:5164
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:AATATCGTGTGGGCAGCACA
Suggested primer 2:GGGATGTTGGACCACTCAGG