Insertion junction: CLIP2.066908_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.066908
Chromosome:chromosome 17
Location:2129109
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g711850 HTR5,HTR19,HTR30 Histone H3; (1 of 35) K11253 - histone H3 (H3) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGCTTCCAACAAAATGGCCCGCACCAAGCAGACCGCTCGCAAGTCCAC
Internal bar code:CTAGAAAGCGGAGGTCACTCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1675
LEAP-Seq percent confirming:3.57143
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTGGGCATGATGGTCAC
Suggested primer 2:CTTGGTGATGCCCTGGATGT