Insertion junction: CLIP2.066911_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.066911
Chromosome:chromosome 13
Location:2694554
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g581550 THG1 Histidine tRNA 5'-guanylyltransferase; (1 of 1) 2.7.7.79 - tRNA(His) guanylyltransferase / Histidine tRNA guanylyltransferase 3'UTR
Cre13.g581600 ASA4 Mitochondrial F1F0 ATP synthase associated protein 4 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACATGCTCTGCGAGTCTCCCCGGCCCTTGCCGCTGCTTTCGATGAAGA
Internal bar code:ATGGCGGTTTGTTAATCATTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2053
LEAP-Seq percent confirming:97.6744
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGGGATAAACTACGCGCA
Suggested primer 2:TACAGGGAGGTCAGGTAGGC