Insertion junction: CLIP2.066914_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066914
Chromosome:chromosome 10
Location:6692293
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g466550 TF2H1 General transcription factor IIH subunit 1; (1 of 1) IPR005607//IPR027079 - BSD domain // TFIIH subunit Tfb1/p62 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACGTGTGAGAGATCACAAGG
Internal bar code:GCTCATCAGTCGTCTCCATTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:288
LEAP-Seq percent confirming:67.6471
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCTGTGGCGATACCCAAA
Suggested primer 2:CCCCTGCCTTCAGTCCTTTT