Insertion junction: CLIP2.066915_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.066915
Chromosome:chromosome 2
Location:4862092
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g109550 HSD1,AHD3 Homoserine dehydrogenase; (1 of 2) K12524 - bifunctional aspartokinase / homoserine dehydrogenase 1 (thrA) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAGATCGTGTCTGATTGGCACGATACGGCATGTAATTCAATTTTACAC
Internal bar code:TCTAGCGTTACTAGGGAATTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1533
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GACCGGGGAACACTTGTCAT
Suggested primer 2:GCAGCCGCGATTTAGTCAAG